BioModelling
Integrates biological mechanistic modeling tools MaBoSS, NeKo, and PhysiCell with AI assistants for simulation workflows.
BioModelling provides MCP servers for three computational biology tools: MaBoSS for Boolean and stochastic modeling, NeKo for systems biology network analysis, and PhysiCell for agent-based cell simulation. Each server enables AI assistants to run simulations, manage modeling sessions, and process biological model data. Available via PyPI and conda.
Source
Repository: https://github.com/marcorusc/mcp-biomodelling-servers
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